- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | hg18-1 | mir-297 | mmu-miR-297a | 20/22 | chr1 | + | 31-51 | 37003899-37003998 | 0.993149 | Paralog | 5/47 | 14/705 |
2 | hg18-2 | mir-574 | hsa-miR-574-5p | 21/23 | chr1 | + | 46-68 | 41898160-41898252 | 0.877321 | Paralog | 3/44 | 36/2260 |
3 | hg18-4 | mir-574 | hsa-miR-574-5p | 21/23 | chr1 | + | 51-72 | 158603444-158603545 | 0.948105 | Paralog | 3/44 | 36/2260 |
4 | hg18-3 | mir-1262 | hsa-miR-1262 | 20/22 | chr1 | + | 52-71 | 68421839-68421917 | 0.999921 | Paralog | 2/6 | 2/10 |
5 | hg18-11 | mir-942 | mml-miR-942 | 20/21 | chr1 | - | 12-32 | 117438789-117438870 | 0.999088 | Paralog | 3/9 | 2/17 |
6 | hg18-14 | mir-574 | hsa-miR-574-5p | 21/23 | chr1 | - | 30-51 | 221327796-221327896 | 0.821079 | Paralog | 3/44 | 36/2260 |
7 | hg18-10 | mir-1178 | hsa-miR-1178 | 19/21 | chr1 | - | 48-66 | 115577193-115577279 | 0.816549 | Paralog | 2/4 | 2/6 |
8 | hg18-13 | mir-1278 | hsa-miR-1278 | 20/22 | chr1 | - | 50-70 | 191372256-191372332 | 0.999992 | Paralog | 2/3 | 2/5 |
9 | hg18-17 | mir-297 | rno-miR-297 | 21/23 | chr10 | + | 10-31 | 131072942-131073017 | 0.892474 | Paralog | 5/47 | 14/705 |
10 | hg18-16 | mir-297 | mmu-miR-297a | 21/22 | chr10 | + | 11-32 | 110359537-110359616 | 0.902032 | Paralog | 5/47 | 14/705 |
11 | hg18-16 | mir-297 | hsa-miR-297 | 20/21 | chr10 | + | 11-31 | 110359537-110359616 | 0.887483 | Paralog | 5/47 | 14/705 |
12 | hg18-24 | mir-378 | cfa-miR-378 | 20/22 | chr10 | - | 10-29 | 132650840-132650919 | 0.967003 | Paralog | 7/10 | 2/14 |
13 | hg18-19 | mir-365 | oan-miR-365* | 21/23 | chr10 | - | 13-34 | 47068056-47068139 | 0.949092 | Paralog | 16/32 | 3/57 |
14 | hg18-32 | mir-1913 | hsa-miR-1913 | 20/22 | chr11 | + | 29-49 | 124633817-124633914 | 0.866543 | Paralog | 1/3 | 2/4 |
15 | hg18-31 | mir-125 | bfl-miR-125b-as | 22/22 | chr11 | + | 51-72 | 121475677-121475760 | 0.985078 | Paralog | 45/62 | 5/195 |
16 | hg18-35 | mir-610 | hsa-miR-610 | 21/21 | chr11 | - | 13-33 | 28034940-28035022 | 0.998982 | Paralog | 2/4 | 2/6 |
17 | hg18-36 | mir-545 | bta-miR-545 | 20/22 | chr11 | - | 14-34 | 44474375-44474458 | 0.91037 | Paralog | 5/9 | 3/15 |
18 | hg18-38 | mir-297 | rno-miR-297 | 21/23 | chr11 | - | 20-42 | 47553904-47553986 | 0.803658 | Paralog | 5/47 | 14/705 |
19 | hg18-34 | mir-574 | hsa-miR-574-5p | 21/23 | chr11 | - | 32-54 | 24598823-24598923 | 0.811076 | Paralog | 3/44 | 36/2260 |
20 | hg18-37 | mir-1224 | mmu-miR-1224 | 20/21 | chr11 | - | 50-70 | 46289270-46289354 | 0.963964 | Paralog | 5/8 | 2/12 |
21 | hg18-41 | mir-877 | hsa-miR-877* | 19/21 | chr11 | - | 51-69 | 117166205-117166305 | 0.823706 | Paralog | 5/10 | 2/13 |
22 | hg18-44 | mir-574 | hsa-miR-574-5p | 21/23 | chr12 | + | 19-41 | 67261134-67261222 | 0.986834 | Paralog | 3/44 | 36/2260 |
23 | hg18-45 | mir-574 | hsa-miR-574-5p | 21/23 | chr12 | + | 50-72 | 120967794-120967892 | 0.87864 | Paralog | 3/44 | 36/2260 |
24 | hg18-48 | mir-297 | mmu-miR-297a | 20/22 | chr12 | - | 32-52 | 100778779-100778880 | 0.997379 | Paralog | 5/47 | 14/705 |
25 | hg18-47 | mir-574 | hsa-miR-574-5p | 21/23 | chr12 | - | 50-70 | 79734339-79734410 | 0.884975 | Paralog | 3/44 | 36/2260 |
26 | hg18-53 | mir-574 | hsa-miR-574-5p | 21/23 | chr13 | - | 47-69 | 41495097-41495176 | 0.990812 | Paralog | 3/44 | 36/2260 |
27 | hg18-55 | mir-574 | hsa-miR-574-5p | 21/23 | chr14 | + | 23-45 | 80520139-80520230 | 0.983819 | Paralog | 3/44 | 36/2260 |
28 | hg18-57 | mir-297 | rno-miR-297 | 21/23 | chr14 | + | 50-72 | 99113667-99113763 | 0.861768 | Paralog | 5/47 | 14/705 |
29 | hg18-56 | mir-574 | hsa-miR-574-5p | 22/23 | chr14 | + | 50-72 | 89996222-89996321 | 0.961819 | Paralog | 3/44 | 36/2260 |
30 | hg18-62 | mir-299 | hsa-miR-299-5p | 20/22 | chr14 | - | 23-43 | 100559868-100559960 | 0.999807 | Paralog | 6/18 | 2/37 |
31 | hg18-60 | mir-202 | dre-miR-202 | 20/22 | chr14 | - | 24-44 | 44734407-44734500 | 0.855083 | Paralog | 10/23 | 2/30 |
32 | hg18-67 | mir-627 | hsa-miR-627 | 21/22 | chr15 | + | 13-34 | 40279072-40279153 | 0.999938 | Paralog | 3/4 | 2/9 |
33 | hg18-66 | mir-101 | mmu-miR-101a* | 20/22 | chr15 | + | 51-71 | 35593926-35594031 | 0.898941 | Paralog | 23/40 | 3/76 |
34 | hg18-69 | mir-629 | hsa-miR-629* | 21/22 | chr15 | + | 51-72 | 68158771-68158851 | 0.998472 | Paralog | 1/1 | 2/2 |
35 | hg18-67 | mir-627 | mml-miR-627 | 22/22 | chr15 | + | 51-72 | 40279070-40279156 | 0.999916 | Paralog | 3/4 | 2/9 |
36 | hg18-65 | mir-1233 | hsa-miR-1233 | 20/20 | chr15 | + | 52-71 | 26307121-26307204 | 0.97645 | Paralog | 2/4 | 8/16 |
37 | hg18-63 | mir-1233 | hsa-miR-1233 | 20/20 | chr15 | + | 52-71 | 19037395-19037478 | 0.97645 | Paralog | 2/4 | 8/16 |
38 | hg18-64 | mir-1233 | hsa-miR-1233 | 20/20 | chr15 | + | 52-71 | 20996220-20996303 | 0.98375 | Paralog | 2/4 | 8/16 |
39 | hg18-70 | mir-1233 | hsa-miR-1233 | 20/20 | chr15 | - | 49-68 | 20257282-20257359 | 0.97645 | Paralog | 2/4 | 8/16 |
40 | hg18-71 | mir-1233 | hsa-miR-1233 | 20/20 | chr15 | - | 49-68 | 26567362-26567439 | 0.97645 | Paralog | 2/4 | 8/16 |
41 | hg18-73 | mir-1233 | hsa-miR-1233 | 20/20 | chr15_random | + | 52-71 | 267966-268049 | 0.97645 | Paralog | 2/4 | 8/16 |
42 | hg18-72 | mir-1233 | hsa-miR-1233 | 20/20 | chr15_random | + | 52-71 | 81387-81470 | 0.97645 | Paralog | 2/4 | 8/16 |
43 | hg18-77 | mir-127 | hsa-miR-127-5p | 20/22 | chr17 | + | 50-70 | 70189025-70189108 | 0.995573 | Paralog | 13/23 | 2/26 |
44 | hg18-84 | mir-574 | hsa-miR-574-5p | 21/23 | chr17 | - | 22-43 | 69214271-69214362 | 0.995776 | Paralog | 3/44 | 36/2260 |
45 | hg18-83 | mir-574 | hsa-miR-574-5p | 21/23 | chr17 | - | 47-69 | 60316478-60316585 | 0.945161 | Paralog | 3/44 | 36/2260 |
46 | hg18-82 | mir-574 | hsa-miR-574-5p | 21/23 | chr17 | - | 47-69 | 40976130-40976237 | 0.945161 | Paralog | 3/44 | 36/2260 |
47 | hg18-87 | mir-1 | mmu-miR-1-2-as | 21/21 | chr18 | + | 10-30 | 17662966-17663044 | 0.945758 | Paralog | 41/61 | 4/166 |
48 | hg18-91 | mir-574 | hsa-miR-574-5p | 21/23 | chr18 | - | 49-71 | 62943362-62943445 | 0.927616 | Paralog | 3/44 | 36/2260 |
49 | hg18-93 | mir-574 | hsa-miR-574-5p | 21/23 | chr19 | + | 37-59 | 35450568-35450674 | 0.980262 | Paralog | 3/44 | 36/2260 |
50 | hg18-95 | mir-574 | hsa-miR-574-5p | 21/23 | chr19 | + | 50-72 | 43849764-43849866 | 0.928484 | Paralog | 3/44 | 36/2260 |
51 | hg18-94 | mir-134 | ggo-miR-134 | 20/21 | chr19 | + | 51-71 | 43202137-43202238 | 0.930826 | Paralog | 11/13 | 2/17 |
52 | hg18-101 | mir-371 | cfa-miR-371 | 21/22 | chr19 | - | 16-37 | 58982730-58982816 | 0.998107 | Paralog | 4/15 | 2/26 |
53 | hg18-96 | mir-642 | hsa-miR-642 | 21/22 | chr19 | - | 17-37 | 50870025-50870109 | 0.999758 | Paralog | 3/3 | 2/5 |
54 | hg18-99 | mir-523 | hsa-miR-523 | 21/23 | chr19 | - | 48-70 | 58893454-58893531 | 0.997922 | Paralog | 3/4 | 4/20 |
55 | hg18-97 | mir-643 | mml-miR-643 | 22/22 | chr19 | - | 49-70 | 57476873-57476949 | 0.999864 | Paralog | 3/6 | 2/10 |
56 | hg18-100 | mir-523 | hsa-miR-523 | 21/23 | chr19 | - | 49-71 | 58924907-58924985 | 0.991598 | Paralog | 3/4 | 4/20 |
57 | hg18-98 | mir-523 | hsa-miR-523 | 21/23 | chr19 | - | 49-71 | 58877228-58877306 | 0.996122 | Paralog | 3/4 | 4/20 |
58 | hg18-98 | mir-523 | mml-miR-523a | 20/21 | chr19 | - | 50-70 | 58877228-58877306 | 0.994507 | Paralog | 3/4 | 4/20 |
59 | hg18-103 | mir-1258 | hsa-miR-1258 | 21/21 | chr2 | + | 51-71 | 180433803-180433887 | 0.999291 | Paralog | 2/4 | 2/9 |
60 | hg18-107 | mir-559 | hsa-miR-559 | 21/21 | chr2 | - | 11-31 | 47458322-47458402 | 0.999856 | Paralog | 2/4 | 2/8 |
61 | hg18-112 | mir-561 | hsa-miR-561 | 21/22 | chr2 | - | 48-69 | 188870476-188870554 | 0.999997 | Paralog | 2/3 | 2/4 |
62 | hg18-112 | mir-561 | ptr-miR-561 | 21/22 | chr2 | - | 49-70 | 188870476-188870554 | 0.999995 | Paralog | 2/3 | 2/4 |
63 | hg18-114 | mir-941 | hsa-miR-941 | 22/23 | chr20 | + | 50-72 | 62021830-62021928 | 0.923985 | Paralog | 1/2 | 6/7 |
64 | hg18-113 | mir-941 | hsa-miR-941 | 22/23 | chr20 | + | 50-72 | 62021411-62021506 | 0.856659 | Paralog | 1/2 | 6/7 |
65 | hg18-116 | mir-1 | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60561952-60562032 | 0.978677 | Paralog | 41/61 | 4/166 |
66 | hg18-117 | mir-125 | bfl-miR-125b-as | 22/22 | chr21 | - | 48-69 | 16884433-16884511 | 0.999471 | Paralog | 45/62 | 5/195 |
67 | hg18-118 | mir-574 | hsa-miR-574-5p | 21/23 | chr22 | + | 1-23 | 22123712-22123782 | 0.963774 | Paralog | 3/44 | 36/2260 |
68 | hg18-122 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | + | 29-51 | 105726805-105726903 | 0.999301 | Paralog | 3/44 | 36/2260 |
69 | hg18-123 | mir-1244 | hsa-miR-1244 | 26/26 | chr3 | + | 49-74 | 118229017-118229103 | 0.915374 | Paralog | 2/15 | 3/51 |
70 | hg18-121 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | + | 50-72 | 53172381-53172487 | 0.92325 | Paralog | 3/44 | 36/2260 |
71 | hg18-126 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | - | 32-54 | 30785827-30785928 | 0.926947 | Paralog | 3/44 | 36/2260 |
72 | hg18-127 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | - | 47-69 | 170728169-170728271 | 0.834147 | Paralog | 3/44 | 36/2260 |
73 | hg18-129 | mir-944 | mml-miR-944 | 21/22 | chr3 | - | 49-70 | 191030409-191030486 | 0.987793 | Paralog | 3/6 | 2/9 |
74 | hg18-130 | mir-574 | hsa-miR-574-5p | 21/23 | chr4 | + | 50-72 | 38633202-38633297 | 0.976711 | Paralog | 3/44 | 36/2260 |
75 | hg18-132 | mir-297 | rno-miR-297 | 21/23 | chr4 | + | 51-72 | 112622689-112622796 | 0.905463 | Paralog | 5/47 | 14/705 |
76 | hg18-133 | mir-574 | hsa-miR-574-5p | 21/23 | chr4 | - | 49-71 | 32342109-32342191 | 0.829917 | Paralog | 3/44 | 36/2260 |
77 | hg18-136 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | + | 39-61 | 56023520-56023628 | 0.944619 | Paralog | 3/44 | 36/2260 |
78 | hg18-137 | mir-545 | cfa-miR-545 | 21/21 | chr5 | + | 47-67 | 110844097-110844189 | 0.873786 | Paralog | 5/9 | 3/15 |
79 | hg18-137 | mir-545 | hsa-miR-545* | 21/22 | chr5 | + | 47-68 | 110844097-110844189 | 0.828727 | Paralog | 5/9 | 3/15 |
80 | hg18-134 | mir-580 | mml-miR-580 | 21/22 | chr5 | + | 51-71 | 36183758-36183836 | 0.999159 | Paralog | 3/6 | 2/10 |
81 | hg18-143 | mir-583 | mml-miR-583 | 20/21 | chr5 | - | 13-33 | 95440600-95440681 | 0.991643 | Paralog | 3/4 | 2/8 |
82 | hg18-148 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | - | 29-51 | 153948267-153948366 | 0.99163 | Paralog | 3/44 | 36/2260 |
83 | hg18-145 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | - | 34-56 | 106644253-106644357 | 0.837005 | Paralog | 3/44 | 36/2260 |
84 | hg18-146 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | - | 47-69 | 127977767-127977847 | 0.840727 | Paralog | 3/44 | 36/2260 |
85 | hg18-141 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | - | 49-71 | 41033274-41033366 | 0.864916 | Paralog | 3/44 | 36/2260 |
86 | hg18-152 | mir-586 | hsa-miR-586 | 21/22 | chr6 | + | 17-38 | 45273400-45273485 | 0.999983 | Paralog | 3/7 | 2/10 |
87 | hg18-152 | mir-586 | ptr-miR-586 | 22/23 | chr6 | + | 19-41 | 45273398-45273486 | 0.999979 | Paralog | 3/7 | 2/10 |
88 | hg18-149 | mir-574 | hsa-miR-574-5p | 21/23 | chr6 | + | 38-60 | 10804651-10804758 | 0.892548 | Paralog | 3/44 | 36/2260 |
89 | hg18-151 | mir-297 | rno-miR-297 | 21/23 | chr6 | + | 47-69 | 40656508-40656580 | 0.926922 | Paralog | 5/47 | 14/705 |
90 | hg18-150 | mir-574 | hsa-miR-574-5p | 21/23 | chr6 | + | 49-71 | 22245717-22245800 | 0.990266 | Paralog | 3/44 | 36/2260 |
91 | hg18-155 | mir-297 | mml-miR-297 | 19/20 | chr6 | - | 41-59 | 57326262-57326371 | 0.963843 | Paralog | 5/47 | 14/705 |
92 | hg18-161 | mir-550 | hsa-miR-550 | 22/23 | chr7 | - | 13-35 | 29686877-29686960 | 0.976365 | Paralog | 3/4 | 3/8 |
93 | hg18-163 | mir-574 | hsa-miR-574-5p | 21/23 | chr7 | - | 41-62 | 92605671-92605741 | 0.99461 | Paralog | 3/44 | 36/2260 |
94 | hg18-165 | mir-1244 | hsa-miR-1244 | 26/26 | chr7 | - | 45-70 | 137738354-137738447 | 0.850704 | Paralog | 2/15 | 3/51 |
95 | hg18-160 | mir-15 | mdo-miR-15a | 20/22 | chr7 | - | 50-69 | 3516325-3516408 | 0.989386 | Paralog | 23/37 | 3/69 |
96 | hg18-167 | mir-486 | hsa-miR-486-5p | 22/22 | chr8 | + | 9-30 | 41637111-41637188 | 0.990069 | Paralog | 5/16 | 2/32 |
97 | hg18-169 | mir-574 | hsa-miR-574-5p | 21/23 | chr8 | + | 44-66 | 108866358-108866443 | 0.926146 | Paralog | 3/44 | 36/2260 |
98 | hg18-168 | mir-297 | rno-miR-297 | 21/23 | chr8 | + | 50-72 | 92410589-92410678 | 0.851732 | Paralog | 5/47 | 14/705 |
99 | hg18-167 | mir-486 | hsa-miR-486-3p | 21/21 | chr8 | + | 51-71 | 41637111-41637190 | 0.993575 | Paralog | 5/16 | 2/32 |
100 | hg18-171 | mir-297 | rno-miR-297 | 21/23 | chr8 | - | 31-53 | 35550752-35550853 | 0.993863 | Paralog | 5/47 | 14/705 |
101 | hg18-174 | mir-31 | oan-miR-31 | 21/23 | chr9 | - | 49-71 | 132883998-132884097 | 0.856506 | Paralog | 40/60 | 2/107 |
102 | hg18-176 | mir-1978 | hsa-miR-1978 | 21/21 | chrM | + | 50-70 | 605-692 | 0.830333 | Paralog | 1/5 | 2/6 |
103 | hg18-179 | mir-367 | gga-miR-367 | 20/21 | chrX | + | 23-42 | 137749809-137749897 | 0.930432 | Paralog | 9/23 | 2/25 |
104 | hg18-182 | mir-574 | hsa-miR-574-5p | 21/23 | chrX | - | 11-32 | 47256720-47256801 | 0.846173 | Paralog | 3/44 | 36/2260 |
105 | hg18-180 | mir-297 | rno-miR-297 | 21/23 | chrX | - | 12-34 | 2152643-2152718 | 0.995551 | Paralog | 5/47 | 14/705 |
106 | hg18-184 | mir-574 | hsa-miR-574-5p | 21/23 | chrX | - | 38-60 | 142517601-142517709 | 0.915148 | Paralog | 3/44 | 36/2260 |
107 | hg18-181 | mir-574 | hsa-miR-574-5p | 21/23 | chrX | - | 40-62 | 28781484-28781593 | 0.89788 | Paralog | 3/44 | 36/2260 |
108 | hg18-185 | mir-514 | cfa-miR-514 | 23/23 | chrX | - | 49-71 | 146139359-146139440 | 0.999257 | Paralog | 7/17 | 4/30 |
109 | hg18-186 | mir-297 | rno-miR-297 | 21/23 | chrY | - | 12-34 | 2152643-2152718 | 0.995551 | Paralog | 5/47 | 14/705 |
Total | 109 record(s). |